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Algorithms for Computational Biology >> Content Detail



Assignments



Assignments

Use the Python interpreter to run the .py files found in this section.

A programming component was included in several of the problem sets. For those problem sets, data sets were given and the students were asked to implement their algorithms using python. To learn more about python, you can visit their Web site.

Problem Set 1 (PDF)

Problem Set 2 (PDF)

Problem Set 3 (PDF)

  • viterbi.py (PY)
  • cpgislands (TXT)
  • cluster.py (PY)
  • tools.py (PY)
  • clustalw (TXT)

Problem Set 4 (PDF)


 








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